Best eCommerce Warehouse Management Systems in 2021.

Last updated on December 2nd, 2021 at 01:49 am

Electronic commerce, also known as eCommerce, refers to purchasing and selling goods and services on digital plateform .

eCommerce is the online sale of physical goods. The transaction takes place online. Warehousing is a crucial part of an eCommerce merchant’s supply chain.

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eCommerce warehouse management system is the storage of physical goods before selling online. This includes the safe and accurate tracking of when the goods arrived, their stock status, and the quantity available at any given time.

It automates the process and creates documents that can easily be audited. An efficient warehouse management system will help your eCommerce business avoid many problems.

Before you start the process of selecting the best eCommerce warehouse management system, it is important first to understand your warehouse requirements and then consider the benefits of an integrated WMS. Below are the essential features to look out for in a WMS:

  • Integration with advanced barcoding technology
  • Full back-office integration, including order entry, stock control, and purchase orders
  • To accommodate future business growth
  • Real-time inventory updates
  • Ready for e-commerce. This includes web store integration and support for B2B EDI.
  • Compliance labeling.
  • Advanced features for reporting capability.
  • Automated inventory receipts and put-away.

The eCommerce Warehouse management system must be implemented at all levels, as follows:

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eCommerce for small businesses:

A small-scale business has a few employees and limited funds. A warehouse management system can help small-scale eCommerce increase its profit margin. It improves warehouse performance.

Warehouses that are efficient and cost-effective to operate will save you time and allow you to focus on expanding your eCommerce business.

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Some of the following eCommerce warehouse management systems are suitable for small businesses:

Software for Fishbowl Inventory


It is software that combines warehouse and manufacturing management. Key features include inventory control, material requirements management, work order management, orders, bills, and planning.

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In addition, automated batch and serial tracking are key features of the software. Fishbowl integrates with various CRM systems , such as Shopify, QuickBooks, and Merchant Services.



Odoo is an integrated, customizable WMS that can be customized to include sales, CRM, project management, and accounting.

Odoo allows users to streamline manual processes and allow teams to work together from one platform. Odoo has a range of apps and modules that could be used to meet a wide variety of business requirements.



Cloud-based warehouse management software. SkuVault offers warehouse management software that includes multi-warehouse inventory visibility and picks, pack, shipping process, and product kitting.

SkuVault can be integrated with other eCommerce software such as QuickBooks, Walmart, Magento Amazon, and eBay.

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SkuVault’s quality feature, which helps customers ensure orders are fulfilled correctly and can identify any errors during the fulfillment process, is what SkuVault is well-known for.

Geneva Business Management Systems

Geneva Business Management System is a cloud-based ERP system that provides small businesses with all the desktop app features. It allows them to manage their business environment using their tools.

You can choose between an on-premise or hosted installation by choosing full access that is available via the internet.

Modules offered by GBMS include distribution and warehouse management, including 3PL, manufacturing, shop floor control, accounting and CRM, attendance, labor, reporting services, as well as QuickBooks.

Chondroitin Warehouse Management


This module is designed to emphasize automation and not manual intervention. Modules comprise sales counter, inventory control, logistics network optimization, and customer service.

All-in-one integration with online advertising venues, shopping carts, and carriers, as well as popular online marketplaces. You can maintain distinct messaging for unlimited brands.

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Medium Size Business:

A medium-sized business can have up to 250 employees. An eCommerce warehouse management system that automates manual processes and saves time is a good one. It provides centralized control and visibility for all warehousing operations as well as inventory movement.

Below are some of the most popular e-commerce warehouse management systems that medium-sized eCommerce businesses use.



Strong WMS that can be used for multi-warehouse and multi-client applications. LA WMS, a cloud WMS, focuses on small and medium-sized eCommerce, retail, and third-party logistics companies that sell products via multiple channels.

Integrated with Sears and Walmart, joining other common ones such as Jet, Shopify, and Amazon. E-commerce and retail brands looking to expand their business will benefit from the support provided by the client portal.

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This allows them to share all shipping details, order status, and inventory.



3dCart provides everything you need to sell products online. It allows you to create, market, design, and manage your store using its built-in features.

It allows you to manage offline and online payments, handle inventories, set delivery options, and more. There are many check-out options. It provides unlimited storage for its users.

It has excellent SEO features that allow it to continuously update its platform to provide the best services for its users.



The world’s leading eCommerce software. With its Point of Sale feature, you can create an omnichannel shopping experience that your customers will love.

LightSpeed permits merchants to manage their online and physical stores from one location . Multi-lingual options and easily manageable functions allow you to handle sales and customers directly from your system.

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It is easy to edit the initial level, which allows unlimited bandwidth usage. To make your website stand out, you can also use SEO and social media marketing.



Wix is becoming more popular among individuals and businesses due to its many features. Its simple interface and affordable price have made it a popular choice. Wix doesn’t require you to be proficient in any programming language.

Wix has a drag and drop interface to create stunning online stores. Wix offers more than 510 templates for electronics, food, drinks, sports, etc.

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The Wix help center contains many articles and tutorials to assist you in creating an online store. In addition, you get a free plan that will never expire.



Squarespace is a popular SaaS eCommerce platform that offers beautiful templates and designs. It has huge collection of  themes.

The templates are diverse in terms of their characteristics and may be utilized for a different of industries. Mobile devices will display the online store well. Squarespace’s style editor allows you to edit fonts, colors, and images.

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Enterprise-Scale ECommerce

Those companies with many employees, lots of customers, and even a lot of revenue from the business are called enterprise businesses. Enterprise Scale businesses need to be more structured.

Here are some WMS that Enterprise-scale eCommerce uses:


big ecommerce

BigCommerce is a giant in eCommerce. SaaS-based software offers a simple interface for its users. BigCommerce’s online stores offer a wonderful user experience.

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BigCommerce has a large community of developers, marketers, and consultants. BigCommerce is known for its themes, which are highly customizable and include all the features a buyer requires. PSDCenter is BigCommerce’s partner.



Shopify cause it quickly to make an digital store. Shopify comes with an integrated eCommerce solution. English is the language of the administration interface for the store.

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Shopify Plus is a new feature that allows you to grow your business with 2 Terabytes of storage. As your team grows, you can create unlimited staff accounts.



Magento has retain the 2nd position in the field of eCommerce Warehouse Management System. This open-source eCommerce platform has may awesome themes and feature. Magento has a coding feature which is an integral part. There are many options for customization.

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Big brands choose Magento because of its flexibility and ease of use. You may also employ a Magento developer to make an unlimited number of attributes for your store. You can do many things with the Magento platform.



WooCommerce has 11% of the global eCommerce market. This is the largest share. This plugin can transform any WordPress website into an online store. You can manage inventory, coupons, and product pages, etc.

WooCommerce allows customization. You can create custom pages and design your store. Because it is open-source, developers are always available to help. These stores offer outstanding SEO performance.



It is a popular WMS due to its customizable features. Open-source shopping cart available. To create an online store, one only needs to pay for web hosting and other modules.

Prestashop has also provide a server based variety which called Prestashop Ready. PrestaShop is simple to use and very user-friendly. It has convenient  interface so it is pretty easy to utilize the application. Anyone can use because of  it’s open-source structure and easy customization.  

iSourse Isopronto 


This is the first application to provide  a full warehouse management solution. It was developed in-house using eWMS technology, with HHT based operations and JIT technology-driven process.

Isourse’s WMS software offers advanced functionality to help manage and optimize resources and assets.

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It can also plan operations and manage employees, which leads to increased output as well as productivity.

It is highly sought-after because of its quality checks at Inbound & Outbound, timely reports, and AI-based functionality. It is currently used by E-Com giants Nykaa, Grofers, and Flipkart.

An efficient eCommerce warehouse management system will save time, money and keep customers satisfied. Many suppliers are now coming up online and mobile commerce.

Dropship programs and web storefronts offer new opportunities for customers to shop. This creates new challenges such as returns and warranty programs. It also allows them to provide value-added services like free or discounted shipping.


The eCommerce warehouse management system is a key component of ensuring a successful online business. An online store with a good warehouse and inventory management system can save time and money while allowing customers to expect more and allow the company to grow.

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